MGD: 2-AMINO-5,6-DIMERCAPTO-7-METHYL-3,7,8A,9-TETRAHYDRO-8-OXA-1,3,9,10-TETRAAZA-ANTHRACEN-4-ONE GUANOSINE DINUCLEOTIDE
MGD is a Ligand Of Interest in 2VPZ designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2VPZ_MGD_A_1766 | 77% | 7% | 0.126 | 0.966 | 1.87 | 2.91 | 12 | 12 | 3 | 0 | 100% | 1 |
| 2VPZ_MGD_A_1765 | 75% | 9% | 0.143 | 0.978 | 1.77 | 2.73 | 8 | 11 | 4 | 0 | 100% | 1 |
| 2VPZ_MGD_E_1765 | 70% | 10% | 0.143 | 0.962 | 1.64 | 2.64 | 7 | 15 | 4 | 0 | 100% | 1 |
| 2VPZ_MGD_E_1766 | 67% | 9% | 0.139 | 0.948 | 1.99 | 2.52 | 9 | 12 | 3 | 0 | 100% | 1 |
| 2VPX_MGD_A_1765 | 69% | 4% | 0.114 | 0.929 | 2.84 | 2.74 | 18 | 11 | 7 | 0 | 100% | 1 |
| 2VPW_MGD_A_1766 | 60% | 4% | 0.181 | 0.969 | 2.71 | 2.81 | 16 | 12 | 5 | 0 | 100% | 1 |
| 2VPY_MGD_A_1766 | 56% | 6% | 0.185 | 0.957 | 2.06 | 2.86 | 12 | 12 | 3 | 0 | 100% | 1 |
| 8RQZ_MGD_C_1006 | 100% | 14% | 0.026 | 0.997 | 2.29 | 1.58 | 13 | 8 | 5 | 0 | 100% | 1 |
| 8R3A_MGD_A_912 | 100% | 44% | 0.026 | 0.994 | 1.1 | 1.06 | 5 | 4 | 2 | 0 | 100% | 1 |
| 1G8K_MGD_E_5201 | 100% | 27% | 0.03 | 0.991 | 1.49 | 1.47 | 7 | 4 | 2 | 0 | 100% | 1 |
| 2E7Z_MGD_A_801 | 100% | 28% | 0.032 | 0.992 | 1.32 | 1.57 | 2 | 8 | 1 | 0 | 100% | 1 |
| 8RTM_MGD_G_902 | 100% | 30% | 0.043 | 0.984 | 1.24 | 1.56 | 5 | 5 | 2 | 0 | 100% | 1 |
