SOG: octyl 1-thio-beta-D-glucopyranoside
SOG is a Ligand Of Interest in 2YCY designated by the RCSB
| Best-fitted instance in this entry |
| Other instances in this entry |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with same target (top 5) |
| Best-fitted instance in this entry |
| Best-fitted PDB instances with different target (top 5) |
| Identifier | Ranking for goodness of fit | Ranking for geometry | Real space R factor | Real space correlation coefficient | RMSZ-bond-length | RMSZ-bond-angle | Outliers of bond length | Outliers of bond angle | Atomic clashes | Stereochemical errors | Model completeness | Average occupancy |
|---|
| 2YCY_SOG_A_1360 | 58% | 52% | 0.105 | 0.881 | 0.63 | 1.2 | - | 2 | 3 | 0 | 100% | 1 |
| 2YCY_SOG_B_1361 | 20% | 31% | 0.199 | 0.8 | 1.61 | 1.17 | 4 | 1 | 3 | 0 | 100% | 1 |
| 2YCY_SOG_B_1360 | 20% | 31% | 0.2 | 0.798 | 1.63 | 1.12 | 3 | 2 | 0 | 0 | 100% | 1 |
| 2YCY_SOG_A_1361 | 12% | 42% | 0.208 | 0.738 | 1.23 | 1.02 | 2 | 3 | 7 | 0 | 100% | 1 |
| 2YCY_SOG_B_1362 | 12% | 31% | 0.185 | 0.711 | 1.18 | 1.56 | 3 | 3 | 4 | 0 | 100% | 1 |
| 2VT4_SOG_A_403 | 73% | 60% | 0.102 | 0.929 | 0.59 | 0.92 | - | - | 0 | 0 | 100% | 1 |
| 2YCX_SOG_B_1362 | 25% | 31% | 0.212 | 0.847 | 1.39 | 1.34 | 2 | 3 | 1 | 0 | 100% | 1 |
| 2YCZ_SOG_B_1360 | 2% | 40% | 0.43 | 0.672 | 1.25 | 1.08 | 2 | 2 | 0 | 0 | 100% | 1 |
| 6TOD_SOG_B_406 | 67% | 43% | 0.106 | 0.913 | 1.05 | 1.17 | 2 | 1 | 0 | 0 | 100% | 1 |
| 6YU6_SOG_A_507 | 64% | 91% | 0.138 | 0.937 | 0.18 | 0.39 | - | - | 3 | 0 | 100% | 1 |
| 6TP6_SOG_A_405 | 61% | 75% | 0.145 | 0.934 | 0.36 | 0.62 | - | - | 0 | 0 | 100% | 1 |
| 6TOT_SOG_A_405 | 55% | 44% | 0.159 | 0.929 | 0.91 | 1.24 | 1 | 1 | 0 | 0 | 100% | 1 |
